BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036H10SP1|AL430313
(719 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig932 1263 0.0
>3x_Contig932
Length = 3027
Score = 1263 bits (636), Expect = 0.0
Identities = 649/654 (99%)
Strand = Plus / Plus
Query: 1 gatcgtctgaaactaattttaattgcactattatcttatctggaagttttaagacattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gatcgtctgaaactaattttaattgcactattatcttatctggaagttttaagacattct 387
Query: 61 acttcatctgtttgtcaatttctcttagtgtatctcaaacaaaccaggtaaaaagaatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 acttcatctgtttgtcaatttctcttagtgtatctcaaacaaaccaggtaaaaagaatta 447
Query: 121 attagtataacactagtaacatgccaccaaagaagcaagtagaggaaaagaaggttctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 attagtataacactagtaacatgccaccaaagaagcaagtagaggaaaagaaggttctat 507
Query: 181 taggccgtccaggtaataacttgaaggcaggtatcgttggtttagctaacgttggtaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 taggccgtccaggtaataacttgaaggcaggtatcgttggtttagctaacgttggtaaat 567
Query: 241 ctacttttttccaagccattactagatgtccattgggtaacccagctaactacccattcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 ctacttttttccaagccattactagatgtccattgggtaacccagctaactacccattcg 627
Query: 301 caaccattgatccagaagaagctagagtcattgttccatctccaagattcgatactctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 caaccattgatccagaagaagctagagtcattgttccatctccaagattcgatactctaa 687
Query: 361 gtgaaatttacaagccagcttccaaagttccagctcatttgactgtttacgatattgctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 688 gtgaaatttacaagccagcttccaaagttccagctcatttgactgtttacgatattgctg 747
Query: 421 gtttgactaagggtgcttctgctggtgaaggtctaggtaatgcctttttgtcccatatca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 748 gtttgactaagggtgcttctgctggtgaaggtctaggtaatgcctttttgtcccatatca 807
Query: 481 gatctgtcgattccatctaccaagtggtccgttgtttcgatgatgctgaaattattcata 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 gatctgtcgattccatctaccaagtggtccgttgtttcgatgatgctgaaattattcata 867
Query: 541 ttgaaggtgatgttgatccagttcgtgatttggatatcatcaacactgaattgagattga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 ttgaaggtgatgttgatccagttcgtgatttggatatcatcaacactgaattgagattga 927
Query: 601 aggatattgaattctctgaaaatcacttttaaattattgaaaaaattaccakaa 654
|||||||||||||||||||||| ||||| ||| ||||||||||||||||| ||
Sbjct: 928 aggatattgaattctctgaaaagcacttggaaagtattgaaaaaattaccagaa 981
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6911
Number of Sequences: 1807
Number of extensions: 6911
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 719
length of database: 10,358,551
effective HSP length: 16
effective length of query: 703
effective length of database: 10,329,639
effective search space: 7261736217
effective search space used: 7261736217
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)